Adapting Scientific Software and Designing Algorithms for Next Generation GPU Computing Platforms

caver 3.0 Tunnels and channels

Tunnels and channels facilitate the transport of small molecules, ions and water solvent in a large variety of proteins. Characteristics of individual transport pathways, including their geometry, physico-chemical properties and dynamics are instrumental for understanding of structure-function relationships of these proteins, for the design of new inhibitors and construction of improved biocatalysts. CAVER is a […]

Force field comparison: Amber, GROMOS, CHARMM, OPLS

Foldit

https://fold.it/portal/